Couple suggestions since I've used quite a few "alternatives to aluminum" mold materials in my time here on TU.... plaster, silicone, FDM/ABS, HDPE urethane....
1. Everything deflects (warps) under temp - some just deflect more than others. Even aluminum deflects with enough heat - we usually don't get them hot enough with plastic - but pour some lead sinkers in a thinner mold and you'll see.
2. Bolts and clamps work - the more the merrier - but at some point the molds just holds too much heat after repeated injections and aside from using a hydraulic press that would likely crush the rapid prototype molds to some degree - you'll need to wait and cool the molds. I use urethane - and on hot days after repeated shots - I have to just let them sit with a fan on them to "undeflect" or I get flash as well. Even aluminum will deflect - that's why production company's use big presses so the can fill those molds with a lot of cavities (that contain alot of heat).
3. The size of your bait vs size of the mold is a HUGE - HUGE - HUGE factor... the size/amount of baits vs molds size is a factor you can control - and can really help. Most of my molds are 5" x 8" to fit in my CNC mill. That mold size with little 2" craw baits will NOT deflect noticeably.... but the same mold size with 4-5 fat swimbaits jammed in there starts deflecting after a few shots. So monitor how many cavities / size of bait you use vs your mold size and you can really help your cause.
4. Related to above - at first I was a cheap guy trying to minimize every square inch of my mold material. It works - but after years of doing that I now have dozens of molds that are all different sizes.... 3x5, 3.5x6, 4x4, 5x8, 6x10 - you name it - I got - LOL. So while I saved a few bucks here and there on my small molds.... clamping is now a pain in the a$$. Being all different sizes I have to use multiple clamps, some I have to just bolt together on their own. Since I altered my thinking to making nearly every mold 5"x8" unless it needs to be bigger - I can put 5-6 molds in a couple bar clamps and crank them down.... so with 2-3 clamps I can hold a bunch of molds nice and tight.... that's a alot faster than bolting/clamping every mold together on its own. Wish I wasn't so cheap to start as some molds I don't even use because of the hassle. So come up with 1 or 2 common mold sizes and stick to them.... in long run it will be helpful.
5. I've found Bench Wood working vises are also helpful.... because they usually provide for a 4"x6" faceplate from and back - they keep things help evenly and are friendly to use.
Hope that helps.
J.